DNA/RNA and Nucleus

  • Chem Phys Lipids. 1993 Nov;66(1-2):75-85. Sphingosine-mediated membrane association of DNA and its reversal by phosphatidic acid. Kinnunen PK, Ryt¦Õmaa M, K¦Ôiv A, Lehtonen J, Mustonen P, Aro A.
  • Nucleic Acids Symp Ser. 1995;(34):111-2. Detection of undegraded oligonucleotides in living sea urchin eggs by fluorescence resonance energy transfer. Uchiyama H, Hirano K, Kashiwasake-Jibu M, Mullah B, Andrus A, Taira K.
  • Proc Natl Acad Sci U S A. 1996 Oct 15;93(21):11493-8. Mechanism of oligonucleotide release from cationic liposomes. Zelphati O, Szoka FC Jr.
  • Electrophoresis. 1996 Jun;17(6):1110-4. Fluorescence resonance energy transfer visualization of DNA aggregates formed during electrophoretic separations in ultradilute hydroxyethylcellulose. Schwinefus JJ, Wang SC, Hammond RW, Morris MD.
  • Proc Natl Acad Sci U S A. 1998 Sep 29;95(20):11538-43. Real time detection of DNA.RNA hybridization in living cells. Sokol DL, Zhang X, Lu P, Gewirtz AM.
  • Proc Natl Acad Sci U S A. 1999 Aug 3;96(16):9077-82. Ligand-induced conformational changes observed in single RNA molecules. Ha T, Zhuang X, Kim HD, Orr JW, Williamson JR, Chu S.
  • Biochim Biophys Acta. 2000 Aug 25;1467(2):347-61. Gene transfer by cationic surfactants is essentially limited by the trapping of the surfactant/DNA complexes onto the cell membrane: a fluorescence investigation. Clamme JP, Bernacchi S, Vuilleumier C, Duportail G, M¦Ély Y.
  • Biophys J. 2000 Jun;78(6):3260-74. Direct observation of specific messenger RNA in a single living cell under a fluorescence microscope. Tsuji A, Koshimoto H, Sato Y, Hirano M, Sei-Iida Y, Kondo S, Ishibashi K.
  • RNA. 2000 Apr;6(4):628-37. Intracellular ribozyme-catalyzed trans-cleavage of RNA monitored by fluorescence resonance energy transfer. Vitiello D, Pecchia DB, Burke JM.
  • J Biol Chem. 2000 Jun 2;275(22):17035-42. Dynamics of NF kappa B and Ikappa Balpha studied with green fluorescent protein (GFP) fusion proteins. Investigation of GFP-p65 binding to DNa by fluorescence resonance energy transfer. Schmid JA, Birbach A, Hofer-Warbinek R, Pengg M, Burner U, Furtmόller PG, Binder BR, de Martin R.
  • Mol Biol Cell. 2001 Oct;12(10):3046-59. Association of human DEAD box protein DDX1 with a cleavage stimulation factor involved in 3'-end processing of pre-MRNA. Bl¦Éoo S, Sun X, Hendzel MJ, Rowe JM, Packer M, Godbout R.
  • J Am Chem Soc. 2001 May 9;123(18):4295-303. Monitoring the conformational fluctuations of DNA hairpins using single-pair fluorescence resonance energy transfer. Grunwell JR, Glass JL, Lacoste TD, Deniz AA, Chemla DS, Schultz PG.
  • Histochem Cell Biol. 2001 Jan;115(1):3-11. Methods for visualizing RNA processing and transport pathways in living cells. Dirks RW, Molenaar C, Tanke HJ. 
  • Cytometry. 2001 Feb 1;43(2):94-100. Texture analysis of fluorescence lifetime images of nuclear DNA with effect of fluorescence resonance energy transfer. Murata S, Herman P, Lakowicz JR.
  • J Microsc. 2003 Sep;211(Pt 3):208-11. Decreased uptake of bodipy-labelled compounds in the presence of the nuclear stain, DRAQ5. Snyder DS, Garon CF.
  • Curr Opin Nephrol Hypertens. 2003 Jul;12(4):455-61. Novel light microscopy imaging techniques in nephrology. Bacallao RL, Yu W, Dunn KW, Phillips CL. 
  • Biophys J. 2003 Jun;84(6):4053-61. Single molecule detection of DNA looping by NgoMIV restriction endonuclease. Katiliene Z, Katilius E, Woodbury NW.
  • RNA Biol. 2004 May;1(1):48-53. Epub 2004 May 15. Antisense molecular beacon strategy for in situ visualization of snRNA and fibrillarin protein interaction in Giardia lamblia.
  • J Biol Chem. 2005 Mar 11;280(10):9390-9. Epub 2004 Dec 15. HIV-1 Tat interactions with p300 and PCAF transcriptional coactivators inhibit histone acetylation and neurotrophin signaling through CREB. Wong K, Sharma A, Awasthi S, Matlock EF, Rogers L, Van Lint C, Skiest DJ, Burns DK, Harrod R.
  • J Cell Biol. 2004 Sep 27;166(7):1015-25. Detection of snRNP assembly intermediates in Cajal bodies by fluorescence resonance energy transfer. Stanĕk D, Neugebauer KM.
  • Nucleic Acids Res. 2004 Apr 14;32(6):e57. Dual FRET molecular beacons for mRNA detection in living cells. Santangelo PJ, Nix B, Tsourkas A, Bao G.
  • J Gene Med. 2004 Jan;6(1):76-84. In situ single cell observation by fluorescence resonance energy transfer reveals fast intra-cytoplasmic delivery and easy release of plasmid DNA complexed with linear polyethylenimine. Itaka K, Harada A, Yamasaki Y, Nakamura K, Kawaguchi H, Kataoka K.
  • Biochem J. 2004 Jan 15;377(Pt 2):289-97. Analysis of Stat3 (signal transducer and activator of transcription 3) dimerization by fluorescence resonance energy transfer in living cells. Kretzschmar AK, Dinger MC, Henze C, Brocke-Heidrich K, Horn F.
  • Nucleic Acids Symp Ser (Oxf). 2005;(49):207-8. Development of real time imaging of specific messenger RNA in a living cell using artificial antisense nucleic acids. Okabe K, Ikeda H, Harada Y, Funatsu T.
  • Chemphyschem. 2005 Dec 9;6(12):2458-71. Single-molecule studies on DNA and RNA. Greulich KO.
  • Biophys J. 2006 Feb 15;90(4):1419-31. Epub 2005 Nov 18. Direct observation of abortive initiation and promoter escape within single immobilized transcription complexes. Margeat E, Kapanidis AN, Tinnefeld P, Wang Y, Mukhopadhyay J, Ebright RH, Weiss S.
  • J Exp Bot. 2006;57(1):33-42. Epub 2005 Nov 16. In vivo imaging of MADS-box transcription factor interactions. Tonaco IA, Borst JW, de Vries SC, Angenent GC, Immink RG.
  • Mutat Res. 2005 Nov 11;579(1-2):133-48. Epub 2005 Jul 28. An HIV-1 encoded peptide mimics the DNA binding loop of NF-kappaB and binds thioredoxin with high affinity. Su G, Min W, Taylor EW.
  • RNA. 2005 Aug;11(8):1201-14. FRET analyses of the U2AF complex localize the U2AF35/U2AF65 interaction in vivo and reveal a novel self-interaction of U2AF35. Chusainow J, Ajuh PM, Trinkle-Mulcahy L, Sleeman JE, Ellenberg J, Lamond AI.
  • Exp Cell Res. 2005 Oct 1;309(2):390-6. Imaging in situ protein-DNA interactions in the cell nucleus using FRET-FLIM. Cremazy FG, Manders EM, Bastiaens PI, Kramer G, Hager GL, van Munster EB, Verschure PJ, Gadella TJ Jr, van Driel R.
  • Biochem Biophys Res Commun. 2005 Jul 15;332(4):1107-14. Imaging Erg and Jun transcription factor interaction in living cells using fluorescence resonance energy transfer analyses.
  • J Biol Chem. 2005 Jul 29;280(30):27809-14. Epub 2005 May 23. H1 family histones in the nucleus. Control of binding and localization by the C-terminal domain. Th'ng JP, Sung R, Ye M, Hendzel MJ.
  • Nucleic Acids Res. 2005 Apr 1;33(6):e61. Determination of tumor necrosis factor receptor-associated factor trimerization in living cells by CFP->YFP->mRFP FRET detected by flow cytometry. He L, Wu X, Simone J, Hewgill D, Lipsky PE.
  • Biotechniques. 2005 Mar;38(3):413-24. Quantitative imaging of protein interactions in the cell nucleus. Voss TC, Demarco IA, Day RN.
  • J Biol Chem. 2005 Apr 15;280(15):15325-39. Epub 2005 Jan 24. The euryarchaeota, nature's medium for engineering of single-stranded DNA-binding proteins. Robbins JB, McKinney MC, Guzman CE, Sriratana B, Fitz-Gibbon S, Ha T, Cann IK.
  • Proc Natl Acad Sci U S A. 2005 Jan 11;102(2):279-84. Epub 2005 Jan 3. Optical tracking of organically modified silica nanoparticles as DNA carriers: a nonviral, nanomedicine approach for gene delivery. Roy I, Ohulchanskyy TY, Bharali DJ, Pudavar HE, Mistretta RA, Kaur N, Prasad PN.
  • Adv Drug Deliv Rev. 2005 Jan 2;57(1):191-210. Studying biophysical barriers to DNA delivery by advanced light microscopy. De Smedt SC, Remaut K, Lucas B, Braeckmans K, Sanders NN, Demeester J.
  • J Nanosci Nanotechnol. 2006 Dec;6(12):3671-6. Direct optical visualization of DNA-DNA interaction by nanoparticle-capture on resonant PET-films. Bauer M, Haglmόller J, Pittner F, Schalkhammer T.
  • ACS Chem Biol. 2006 Oct 24;1(9):575-84. Evolving the substrate specificity of O6-alkylguanine-DNA alkyltransferase through loop insertion for applications in molecular imaging. Heinis C, Schmitt S, Kindermann M, Godin G, Johnsson K.
  • J Cell Sci. 2006 Dec 15;119(Pt 24):5160-8. Localization of agonist-sensitive PtdIns(3,4,5)P3 reveals a nuclear pool that is insensitive to PTEN expression. Lindsay Y, McCoull D, Davidson L, Leslie NR, Fairservice A, Gray A, Lucocq J, Downes CP.
  • Methods. 2006 Dec;40(4):353-9. Analysis of in vivo targets of transcriptional activators by fluorescence resonance energy transfer. Bhaumik SR.
  • J Control Release. 2006 Nov;116(1):83-9. Epub 2006 Sep 22. Evaluating the intracellular stability and unpacking of DNA nanocomplexes by quantum dots-FRET. Ho YP, Chen HH, Leong KW, Wang TH.
  • J Fluoresc. 2006 Nov;16(6):839-45. Epub 2006 Sep 22. Time-resolved FRET and FLIM of four-way DNA junctions. Mountford CP, Mount AR, Evans SA, Su TJ, Dickinson P, Buck AH, Campbell CJ, Terry JG, Beattie JS, Walton AJ, Ghazal P, Crain J.
  • Mol Cell Biol. 2006 Nov;26(21):8087-98. Epub 2006 Aug 14. Dynamic interactions between Pit-1 and C/EBPalpha in the pituitary cell nucleus. Demarco IA, Voss TC, Booker CF, Day RN.
  • Cell Res. 2006 Jun;16(6):585-98. Visualization of bHLH transcription factor interactions in living mammalian cell nuclei and developing chicken neural tube by FRET. Wang C, Bian W, Xia C, Zhang T, Guillemot F, Jing N.
  • Nucleic Acids Res. 2006 Apr 26;34(7):2128-36. Print 2006. Specific RNA binding to ordered phospholipid bilayers. Janas T, Janas T, Yarus M.
  • J Biol Chem. 2006 Jun 16;281(24):16530-5. Epub 2006 Apr 17. FRET analysis of in vivo dimerization by RNA-editing enzymes. Chilibeck KA, Wu T, Liang C, Schellenberg MJ, Gesner EM, Lynch JM, MacMillan AM.
  • Anal Bioanal Chem. 2006 Jun;385(3):500-17. Epub 2006 Apr 12. Optical technologies for the read out and quality control of DNA and protein microarrays. Sch¦Äferling M, Nagl S.
  • Biophys J. 2006 Jun 15;90(12):4605-17. Epub 2006 Mar 31. Conformational heterogeneity in RNA polymerase observed by single-pair FRET microscopy. Coban O, Lamb DC, Zaychikov E, Heumann H, Nienhaus GU.
  • Ann Biomed Eng. 2006 Jan;34(1):39-50. Epub 2006 Feb 7. Nanostructured probes for RNA detection in living cells. Santangelo P, Nitin N, Bao G.
  • Proc Natl Acad Sci U S A. 2008 Jan 8;105(1):157-61. Epub 2007 Dec 28. Interaction with host SGS3 is required for suppression of RNA silencing by tomato yellow leaf curl virus V2 protein. Glick E, Zrachya A, Levy Y, Mett A, Gidoni D, Belausov E, Citovsky V, Gafni Y.
  • Nano Lett. 2007 Dec;7(12):3832-9. Epub 2007 Nov 6. Triplex addressability as a basis for functional DNA nanostructures. Tumpane J, Kumar R, Lundberg EP, Sandin P, Gale N, Nandhakumar IS, Albinsson B, Lincoln P, Wilhelmsson LM, Brown T, Nord¦Én B.
  • Nucleic Acids Res. 2007;35(18):e124. Epub 2007 Sep 22. Surveillance of siRNA integrity by FRET imaging. J¦Ärve A, Mόller J, Kim IH, Rohr K, MacLean C, Fricker G, Massing U, Eberle F, Dalpke A, Fischer R, Trendelenburg MF, Helm M.
  • Photochem Photobiol. 2007 May-Jun;83(3):686-91. Vault ribonucleoprotein particles and the central mass of the nuclear pore complex. Dickenson NE, Moore D, Suprenant KA, Dunn RC.
  • J Med Microbiol. 2007 Jun;56(Pt 6):772-7. Real-time PCRs for detection of Trichomonas vaginalis beta-tubulin and 18S rRNA genes in female genital specimens. Simpson P, Higgins G, Qiao M, Waddell R, Kok T.
  • J Cell Sci. 2007 May 1;120(Pt 9):1540-50. Epub 2007 Apr 3. A regulatory role for CRM1 in the multi-directional trafficking of splicing snRNPs in the mammalian nucleus. Sleeman J.
  • J Phys Chem B. 2007 Mar 22;111(11):2986-90. Epub 2007 Feb 27. Accurate single molecule FRET efficiency determination for surface immobilized DNA using maximum likelihood calculated lifetimes. Edel JB, Eid JS, Meller A.
  • Proc Natl Acad Sci U S A. 2007 Mar 20;104(12):4840-5. Epub 2007 Mar 14. Single-molecule measurements of the opening and closing of the DNA gate by eukaryotic topoisomerase II. Smiley RD, Collins TR, Hammes GG, Hsieh TS.
  • J Virol. 2007 May;81(10):5000-13. Epub 2007 Mar 7. APOBEC3G multimers are recruited to the plasma membrane for packaging into human immunodeficiency virus type 1 virus-like particles in an RNA-dependent process requiring the NC basic linker. Burnett A, Spearman P.
  • Methods. 2007 Mar;41(3):342-52. Homebuilt single-molecule scanning confocal fluorescence microscope studies of single DNA/protein interactions. Zheng H, Goldner LS, Leuba SH.
  • J Mol Cell Cardiol. 2007 Mar;42(3):662-9. Epub 2007 Jan 5. Mechanistic basis for the pathogenesis of long QT syndrome associated with a common splicing mutation in KCNQ1 gene.
  • BMC Biotechnol. 2007 Jan 3;7:2. Intravital imaging of fluorescent markers and FRET probes by DNA tattooing. Bins AD, van Rheenen J, Jalink K, Halstead JR, Divecha N, Spencer DM, Haanen JB, Schumacher TN.
  • RNA. 2009 Jan;15(1):97-103. Epub 2008 Nov 25. Visualizing protein-RNA interactions inside cells by fluorescence resonance energy transfer. Lorenz M.
  • Eur Biophys J. 2009 Apr;38(4):395-405. Epub 2008 Nov 18. Probing complexes with single fluorophores: factors contributing to dispersion of FRET in DNA/RNA duplexes. Cherny DI, Eperon IC, Bagshaw CR.
  • Acta Biochim Biophys Sin (Shanghai). 2008 Nov;40(11):934-42. Construction of fluorescence resonance energy transfer vectors and their application in study of structure and function of signal transducers and activators of transcription 1. Han F, Luo Y, Ge N, Xu J.
  • Biochim Biophys Acta. 2009 Feb;1793(2):325-34. Epub 2008 Oct 10. A membrane network of receptors and enzymes for adenine nucleotides and nucleosides. Schicker K, Hussl S, Chandaka GK, Kosenburger K, Yang JW, Waldhoer M, Sitte HH, Boehm S.
  • Methods Mol Biol. 2008;463:123-35. Time-lapse Microscopy and Fluorescence Resonance Energy Transfer to Analyze the Dynamics and Interactions of Nucleolar Proteins in Living Cells. Louvet E, Tramier M, Angelier N, Hernandez-Verdun D.
  • Biochem Soc Trans. 2008 Aug;36(Pt 4):776-9. Visualizing the organization and reorganization of transcription complexes for gene expression. Burrows PC, Wigneshweraraj S, Bose D, Joly N, Schumacher J, Rappas M, Pape T, Stockley PG, Zhang X, Buck M.
  • Proc Natl Acad Sci U S A. 2008 Jun 24;105(25):8613-8. Epub 2008 Jun 18. Single-molecule measurements of importin alpha/cargo complex dissociation at the nuclear pore. Sun C, Yang W, Tu LC, Musser SM.
  • J Cell Biol. 2008 Jun 16;181(6):921-34. Spatial mapping of splicing factor complexes involved in exon and intron definition. Ellis JD, Ll¦Ères D, Denegri M, Lamond AI, C¦Áceres JF.
  • Nucleic Acids Res. 2008 Jul;36(12):e71. Epub 2008 May 30. Nuclear delivery of NFkappaB-assisted DNA/polymer complexes: plasmid DNA quantitation by confocal laser scanning microscopy and evidence of nuclear polyplexes by FRET imaging. Breuzard G, Tertil M, Gon¦Çalves C, Cheradame H, G¦Éguan P, Pichon C, Midoux P.
  • J Am Chem Soc. 2008 Jun 11;130(23):7182-3. Epub 2008 May 20. Two color RNA intercalating probe for cell imaging applications. Stevens N, O'Connor N, Vishwasrao H, Samaroo D, Kandel ER, Akins DL, Drain CM, Turro NJ.
  • Proc Natl Acad Sci U S A. 2008 Nov 11;105(45):17245-9. Epub 2008 May 12. A DNA-based nanomechanical device with three robust states. Chakraborty B, Sha R, Seeman NC.
  • Proc Natl Acad Sci U S A. 2008 Apr 8;105(14):5289-94. Epub 2008 Apr 7. A polycatenated DNA scaffold for the one-step assembly of hierarchical nanostructures. Weizmann Y, Braunschweig AB, Wilner OI, Cheglakov Z, Willner I.
  • Biosens Bioelectron. 2008 Jul 15;23(12):1878-82. Epub 2008 Mar 10. DNA hybridization detection in a microfluidic channel using two fluorescently labelled nucleic acid probes. Chen L, Lee S, Lee M, Lim C, Choo J, Park JY, Lee S, Joo SW, Lee KH, Choi YW.
  • J Fluoresc. 2008 May-Jul;18(3-4):727-32. Epub 2008 Mar 12. Interaction among cadmium sulfide nanoparticles, acridine orange, and deoxyribonucleic acid in fluorescence spectra and a method for deoxyribonucleic acid determination. Mao J, Lai S, Chang X, Liu W.
  • Acta Biomater. 2008 Jul;4(4):791-8. Epub 2008 Feb 2. Quantum-dot-assisted fluorescence resonance energy transfer approach for intracellular trafficking of chitosan/DNA complex. Lee JI, Ha KS, Yoo HS.
  • Proc Natl Acad Sci U S A. 2010 Jan 12;107(2):715-20. Epub 2009 Dec 18. Conformational transitions in DNA polymerase I revealed by single-molecule FRET. Santoso Y, Joyce CM, Potapova O, Le Reste L, Hohlbein J, Torella JP, Grindley ND, Kapanidis AN.
  • J Cell Biol. 2009 Nov 16;187(4):481-96. Quantitative analysis of chromatin compaction in living cells using FLIM-FRET. Ll¦Ères D, James J, Swift S, Norman DG, Lamond AI.
  • J Biol Chem. 2010 Jan 29;285(5):3092-102. Epub 2009 Nov 17. ERK nuclear translocation is dimerization-independent but controlled by the rate of phosphorylation. Lidke DS, Huang F, Post JN, Rieger B, Wilsbacher J, Thomas JL, Pouyss¦Égur J, Jovin TM, Lenormand P.
  • Proc Natl Acad Sci U S A. 2009 Dec 1;106(48):20294-9. Epub 2009 Nov 11. Single molecule measurement of the "speed limit" of DNA polymerase. Schwartz JJ, Quake SR.
  • Mol Endocrinol. 2009 Dec;23(12):2086-94. Epub 2009 Oct 23. Deficiency of ferritin heavy-chain nuclear import in triple a syndrome implies nuclear oxidative damage as the primary disease mechanism. Storr HL, Kind B, Parfitt DA, Chapple JP, Lorenz M, Koehler K, Huebner A, Clark AJ.
  • Proc Natl Acad Sci U S A. 2009 Sep 22;106(38):16257-62. Epub 2009 Sep 3. Real-time imaging of histone H4 hyperacetylation in living cells. Sasaki K, Ito T, Nishino N, Khochbin S, Yoshida M.
  • Angew Chem Int Ed Engl. 2009;48(42):7833-6. Consecutive formation of G-quadruplexes in human telomeric-overhang DNA: a protective capping structure for telomere ends. Xu Y, Ishizuka T, Kurabayashi K, Komiyama M.  
  • Genes Cells. 2009 Oct;14(10):1183-96. Epub 2009 Sep 14. Transactivation activity of LBP-1 proteins and their dimerization in living cells. Katsura A, Kimura K, Hosoi K, Tomokuni Y, Nesori M, Goryo K, Numayama-Tsuruta K, Torii S, Yasumoto K, Gotoh O, Takada M, Fukumura H, Sogawa K.
  • Plant Physiol. 2009 Nov;151(3):1197-206. Epub 2009 Aug 21. A nuclear-targeted cameleon demonstrates intranuclear Ca2+ spiking in Medicago truncatula root hairs in response to rhizobial nodulation factors. Sieberer BJ, Chabaud M, Timmers AC, Monin A, Fournier J, Barker DG.
  • Curr Pharm Biotechnol. 2009 Aug;10(5):559-68. Single-molecule fluorescence studies of nucleosome dynamics. Gurunathan K, Levitus M.
  • Virology. 2009 Sep 30;392(2):169-77. Epub 2009 Aug 3. Visualization of the dynamic multimerization of human Cytomegalovirus pp65 in punctuate nuclear foci. Cui Z, Zhang K, Zhang Z, Liu Y, Zhou Y, Wei H, Zhang XE.
  • Biophys J. 2009 Jul 8;97(1):195-204. spFRET using alternating excitation and FCS reveals progressive DNA unwrapping in nucleosomes. Koopmans WJ, Buning R, Schmidt T, van Noort J.
  • Nucleic Acids Res. 2009 Sep;37(17):e116. Epub 2009 Jun 26. A FRET-based assay for characterization of alternative splicing events using peptide nucleic acid fluorescence in situ hybridization. Blanco AM, Rausell L, Aguado B, Perez-Alonso M, Artero R.
  • Nature. 2009 May 7;459(7243):73-6. Self-assembly of a nanoscale DNA box with a controllable lid. Andersen ES, Dong M, Nielsen MM, Jahn K, Subramani R, Mamdouh W, Golas MM, Sander B, Stark H, Oliveira CL, Pedersen JS, Birkedal V, Besenbacher F, Gothelf KV, Kjems J.
  • J Biol Chem. 2009 Jul 17;284(29):19310-20. Epub 2009 May 6. Proliferating cell nuclear antigen is protected from degradation by forming a complex with MutT Homolog2. Yu Y, Cai JP, Tu B, Wu L, Zhao Y, Liu X, Li L, McNutt MA, Feng J, He Q, Yang Y, Wang H, Sekiguchi M, Zhu WG.
  • Annu Rev Biomed Eng. 2009;11:25-47. Fluorescent probes for live-cell RNA detection. Bao G, Rhee WJ, Tsourkas A.
  • Anal Chem. 2009 May 15;81(10):4113-20. Toward a multiplexed solid-phase nucleic acid hybridization assay using quantum dots as donors in fluorescence resonance energy transfer. Algar WR, Krull UJ.
  • Photochem Photobiol Sci. 2009 Apr;8(4):486-96. Epub 2009 Mar 12. Single-molecule photophysics of oxazines on DNA and its application in a FRET switch. Vogelsang J, Cordes T, Tinnefeld P.
  • Nucleic Acids Res. 2009 Jun;37(10):3391-406. Epub 2009 Mar 31. Linker histone H1 is present in centromeric chromatin of living human cells next to inner kinetochore proteins. Orthaus S, Klement K, Happel N, Hoischen C, Diekmann S.
  • EMBO J. 2009 Feb 18;28(4):405-16. Epub 2009 Jan 22. BLM helicase measures DNA unwound before switching strands and hRPA promotes unwinding reinitiation. Yodh JG, Stevens BC, Kanagaraj R, Janscak P, Ha T.
  • RNA Biol. 2009 Jan-Mar;6(1):25-30. Epub 2009 Jan 2. The biochemistry of RNA metabolism studied in situ. Nickerson JA.